Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889858.1_cds_XP_016444535.1_39583
CDS Infomation

[gene=LOC107769793] [db_xref=GeneID:107769793] [protein=pentatricopeptide repeat-containing protein At5g66520-like] [protein_id=XP_016444535.1] [location=145439..147040] [gbkey=CDS]
Sequence

ATGGCTGCTGCTTCCATAAGCGCCCCCGTGCCCAAGCAAAATATTCTAGAATTTCAAAAT
GGAAGAGGCAATAAAACCCCAAGCAACGTTCTGTTGCTCCAGATGTGTCGCCAAAACAAG
GAAGTCAAACAATTACATAGCCAACTGATTATTTCAGGATTGATTCGTCGACCTCCAAAT
GCAGCAAGGCTAGTAGAATCCTATGTTGGAGTGTCTGAAACTGATGATGCATTGTTAGTC
TTCAAATCATCAATTCAATCACCTGATACCTTTGCTTATAATGTTATGATCAGAGGTCTG
ATTCTTACCAAGCGGCCTAAGGGGTCACTTTTGTTGTATGAACAATTATGTTCAGAGGGT
CTTGTACCGGATAGCCATACCTATACTTTTGTTCTCAAAGCATGTTCCCATTTGAAAGCT
ATTCTTCAAGGTAAACAAGTACATGCACAAATTATTAAGACTGGTGTAGAACCAAATACC
CACGTCTGTAGCTCTCTAATTTCTATGTATTCCTATGCTGGAAGCATGAAATCTGCAAGA
CAAGTTCTTGATGAGTATTATGAGGATAATAATAATAATGACATTTGCCCCCTTAACTCC
ATGATTACCGTTTATATGAATGAGGGACTTGTGGAAAAGGCTAAAGAAATCTTTGATACA
ATGGAAAATAAGGATACTGCAACTTGGAGTGCAATGTTATCAGGGTACACTAAAAATGGT
ATGCACGAGGTTGCACTTGTCACCTTTCAGAAAATGATGAGTTATAGAGTTCCACTGAAT
GAATCTTCACTTGTGTGCACTCTATCAGCCTGTGGAGAGTTGGGAGCTTTGGATCAGGGA
AGATGGATACACACATATATCATAAACAAGAGAGAAATTGTAATGAGTGTCAATCTTGGT
ACTGCTTTAGTTGACATGTATGCCAGGTGTGGGTGCATTGAGTTTAGTTATCAGTTATTT
AAGAATATGGCTGAGAGAGATGTTGTAACTTGGGGAGTGATCATTTCAGGTTTTGCAACA
CATGGGCAAGCCAATAAATGCTTTCAACTATTTGATGAGATGATTGAGTCCGGAGTTGAG
CCAAATGGAGTCATCTTTGTGGCTATCCTCTCTGCCTGTTCTCATGCAGGACAAGTCGGA
CAGGGATGTCACTACTTCGACCAAATGGTGCATCACTTCGGAATTAGACCATCCATTGAG
CATTTTGGATGCATGGTGGATCTTCTTGGCCGTGCTGGGAGGCTTGGAGAAGCAGAACAA
CTCATTTTATCGATGCCGGAAGAACCTAACTCGATTGTATTGGGCGCATTGCTTAATGCT
TGTAGAATCCATAGTGATGTTGAGAGGGGGAGGCATCTATTCAGTCGGCTAATCAATCTG
GGACCTTCACCCGATCGATATAAATTAGCAGCATCTCTGTTTGCTAATAATGGAGAAGGG
TACGAGATTAGAAAATTGGTCAAGGATGAAGATTTGGTAGCTAGATGTGGCTTGAGCAAT
ATTCAGGTGGATGGGGTGGTTCACGAGTTCATGGTCAGTGATATCGCGAATAACAGGGCC
CGAGATATCTACGAGGCATTAGGAGGATTAGTAGATCAATAA

Peptide Sequence

PEP ID

XP_016444535.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nicotiana tabacum]
Sequence

MAAASISAPVPKQNILEFQNGRGNKTPSNVLLLQMCRQNKEVKQLHSQLIISGLIRRPPN
AARLVESYVGVSETDDALLVFKSSIQSPDTFAYNVMIRGLILTKRPKGSLLLYEQLCSEG
LVPDSHTYTFVLKACSHLKAILQGKQVHAQIIKTGVEPNTHVCSSLISMYSYAGSMKSAR
QVLDEYYEDNNNNDICPLNSMITVYMNEGLVEKAKEIFDTMENKDTATWSAMLSGYTKNG
MHEVALVTFQKMMSYRVPLNESSLVCTLSACGELGALDQGRWIHTYIINKREIVMSVNLG
TALVDMYARCGCIEFSYQLFKNMAERDVVTWGVIISGFATHGQANKCFQLFDEMIESGVE
PNGVIFVAILSACSHAGQVGQGCHYFDQMVHHFGIRPSIEHFGCMVDLLGRAGRLGEAEQ
LILSMPEEPNSIVLGALLNACRIHSDVERGRHLFSRLINLGPSPDRYKLAASLFANNGEG
YEIRKLVKDEDLVARCGLSNIQVDGVVHEFMVSDIANNRARDIYEALGGLVDQ

Transcript Sequence

Gene sequence data has not been registered.